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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105087843_105088387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105087843 - 105088387

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCAAT

U12 Branch Point Sequence:

TACTGTGTAACA

Flanking Amino Acid:

PIAEGYAGAPGYPKLSPPTT

Intron Amino Acid Position:

899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

64.3

0.36

1.3

39.1

Major PPT

85.7

0.8

0.7

81.4

30.6

Minor 5ss

23.1

-3.1

3.2

Minor BPS

47.7

-0.1

2.3

63.63

43.2

Associated Gene:

Gene:

EMILIN2

Ensembl Gene ID:

ENSAPLG00000013210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037350

105059245 - 105094865

35621

ENSAPLT00000013753

105060142 - 105094865

34724