Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105093709_105094447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105093709 - 105094447

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TACCTCAGAAAA

Flanking Amino Acid:

NDGDYYNPNTGIFTSPYEGR

Intron Amino Acid Position:

957

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

0.79

0.7

80.2

25.2

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

44.3

-0.4

1.7

53.3

37.9

Associated Gene:

Gene:

EMILIN2

Ensembl Gene ID:

ENSAPLG00000013210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037350

105059245 - 105094865

35621

ENSAPLT00000013753

105060142 - 105094865

34724