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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105105441_105105772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105105441 - 105105772

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGAGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTAATATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

IQERTKGNKSSYYRLSELVE

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

61.4

37.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.8

0.72

0.8

78.4

33.8

Minor 5ss

32.2

-2

3.3

40.3

39.9

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

LPIN2

Ensembl Gene ID:

ENSAPLG00000012547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040091

105104185 - 105138313

34129

ENSAPLT00000022459

105104185 - 105147684

43500

ENSAPLT00000013150

105105089 - 105138313

33225