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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105113246_105113355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105113246 - 105113355

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTATTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTTTTCTACACA

Flanking Amino Acid:

LQVFQKSLPKATVESWVKEK

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

0.81

0.8

83.7

31.1

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

59.4

0.29

2.1

78.35

38.8

Associated Gene:

Gene:

LPIN2

Ensembl Gene ID:

ENSAPLG00000012547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022459

105104185 - 105147684

43500

ENSAPLT00000013150

105105089 - 105138313

33225

ENSAPLT00000040091

105104185 - 105138313

34129