About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105176833_105177885_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
105176833 - 105177885

Intron Length:
1053

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGAGCC

5'SS Class:
major

3'SS Sequence:
ATTTTTTCTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTCTAAAG

Flanking Amino Acid:
SRLAIDTKGGKSKATFKDLG

Intron Amino Acid Position:
1187

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
1
69.7
33.2

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.3
0.64
1
79.4
32.4

Minor 5ss
33.4
-1.9
3.4
43.5
37.7

Minor BPS
57
0.08
1.8
68.81
38.6

Associated Gene:

Gene:
MYOM1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

105154011 - 105230113
76103

105154011 - 105230113
76103

105154011 - 105230113
76103