Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105188891_105189827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105188891 - 105189827

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTGGTGATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCTAATTAAAAA

Flanking Amino Acid:

SEPIEVQAAIGGGLLHGVCP

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

85.8

25.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

65.4

0.35

42.1

Minor 5ss

-0.9

2.9

43.6

Minor BPS

-0.3

1.9

57.98

41.5

Associated Gene:

Gene:

MYOM1

Ensembl Gene ID:

ENSAPLG00000010648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044170

105154011 - 105230113

76103

ENSAPLT00000011290

105154011 - 105230113

76103