Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105203320_105204889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105203320 - 105204889

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

TTCCCTTATACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAC

U12 Branch Point Sequence:

TTTCCCTTATAC

Flanking Amino Acid:

HAGTVSMPLSLGVTPHGYAS

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.3

64.4

42.8

Major BPS

52.9

0.07

1.1

59.6

32.7

Major PPT

80.8

0.69

0.8

76.1

31.5

Minor 5ss

42.4

-0.8

2.8

57.2

40.7

Minor BPS

65.5

0.47

1.7

77.58

37.7

Associated Gene:

Gene:

MYOM1

Ensembl Gene ID:

ENSAPLG00000010648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011290

105154011 - 105230113

76103

ENSAPLT00000044170

105154011 - 105230113

76103

ENSAPLT00000018810

105154011 - 105230113

76103