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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105309850_105314609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105309850 - 105314609

Intron Length:

4760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACGGGC

5'SS Class:

major

3'SS Sequence:

TTTGTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTTTTGTAATT

Flanking Amino Acid:

LGAGTMETTQGVVAISGSET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

58.8

40.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

0.9

74.9

38.8

Minor 5ss

29.7

-2.3

3.5

41.1

45.6

Minor BPS

58.1

0.33

78.3

39.3

Associated Gene:

Gene:

TGIF1

Ensembl Gene ID:

ENSAPLG00000010541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025944

105307959 - 105316767

8809