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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105312507_105314609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105312507 - 105314609

Intron Length:

2103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGATTG

5'SS Class:

major

3'SS Sequence:

TTTGTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTTTTGTAATT

Flanking Amino Acid:

MFSGVVAISGSET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

1.1

73.6

37.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

0.9

74.9

38.8

Minor 5ss

37.9

-1.4

47.9

47.7

Minor BPS

58.1

0.33

78.3

39.3

Associated Gene:

Gene:

TGIF1

Ensembl Gene ID:

ENSAPLG00000010541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019466

105311566 - 105316767

5202