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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105425_105650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105425 - 105650

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCTAT

U12 Branch Point Sequence:

CTATGGTGAAAT

Flanking Amino Acid:

STLLKLLTGELLPTDGMIRK

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.5

37.5

Major BPS

0.37

1.3

64.5

42.5

Major PPT

84.8

0.78

0.7

80.7

24.5

Minor 5ss

54.3

0.15

2.3

68.6

42.5

Minor BPS

42.1

-0.5

2.5

62.82

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009615

100810 - 108472

7663