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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105793667_105796366_R

Intron Information:

Intron Rank:

133782

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

105793667 - 105796366

Intron Length:

2700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCAAA

5'SS Class:

weak_major

3'SS Sequence:

TTGTTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTCTCTTCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

66.8

40.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

82.1

0.72

0.8

78.1

30.8

Minor 5ss

51.2

0.04

2.3

65.8

45.4

Minor BPS

74.4

0.84

1.5

87.98

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040882

105791989 - 105796426

4438

ENSAPLT00000023066

105793385 - 105796426

3042