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Intron Name: Anas_platyrhynchos_platyrhynchos_2_105798349_105803575_F

Intron Information:

Intron Rank:

126984

Intron Class:

major

Intron Phase:

Intron Coordinates:

105798349 - 105803575

Intron Length:

5227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGGA

5'SS Class:

major

3'SS Sequence:

TGCCTTTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

GTGAGTCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.9

36.3

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

78.6

0.64

0.8

77.1

31.6

Minor 5ss

31.5

-2.1

3.4

38.5

40.9

Minor BPS

46.6

-0.1

2.1

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041514

105797698 - 105804409

6712