Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105953629 - 105953892

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGGGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTCCTTGGGATA

Flanking Amino Acid:

TGDADIDHDQALAQAIKEAK

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

62.3

0.28

1.1

60.3

40.5

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

40.6

-0.7

1.9

50.88

34.9

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032749

105952076 - 106042563

90488

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105953629_105953892_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: