Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105953974 - 105955083

Intron Length:

1110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ACCTCCCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

AGTTACTGACAT

Flanking Amino Acid:

STTTTTHITKTVKGGISETR

Intron Amino Acid Position:

799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.2

36.1

Major BPS

0.7

0.9

79.6

29.1

Major PPT

66.1

0.36

0.9

63.1

32.7

Minor 5ss

33.1

-1.9

37.7

Minor BPS

46.6

-0.1

66.98

42.7

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032749

105952076 - 106042563

90488

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105953974_105955083_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: