Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105955183 - 105955602

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCTGATGATT

Flanking Amino Acid:

TKTITYESSQVDCGADSEPG

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.1

0.63

0.9

70.2

41.3

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

46.2

-0.2

2.2

72.85

38.3

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032749

105952076 - 106042563

90488

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105955183_105955602_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: