Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105955735 - 105956548

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTCGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTTCTGTTTACA

Flanking Amino Acid:

DSLERKPHFESPVVKTETIS

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

72.7

44.5

Major BPS

71.8

0.54

1.2

32.5

Major PPT

76.8

0.6

0.9

72.2

Minor 5ss

41.5

-0.9

2.9

59.6

44.8

Minor BPS

49.8

-0

2.3

72.36

39.3

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032749

105952076 - 106042563

90488

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032459

105952076 - 106043456

91381

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105955735_105956548_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: