Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105980932 - 105984245

Intron Length:

3314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TATTCAAAAAGT

Flanking Amino Acid:

MYGVDLHHAKDSEGVEIMLG

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

0.82

0.8

83.9

25.3

Major PPT

80.6

0.69

0.8

73.1

37.3

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

45.1

-0.2

2.3

71.46

44.8

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032749

105952076 - 106042563

90488

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105980932_105984245_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: