Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105984334 - 105984671

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TTAATGTTGACG

Flanking Amino Acid:

DKVIELHKSHRGMTPAEAEM

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

81.8

0.72

0.8

80.5

31.5

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

48.3

-0.2

2.2

59.45

42.5

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032749

105952076 - 106042563

90488

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105984334_105984671_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: