Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105984891 - 105986147

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTTTAAA

5'SS Class:

major

3'SS Sequence:

TGCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

CCTGTCTGAGTG

Flanking Amino Acid:

DPAQLSEDITRYYLCLQLRD

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

73.9

31.1

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

76.7

0.6

0.8

69.9

30.9

Minor 5ss

35.8

-1.6

2.6

41.9

44.8

Minor BPS

43.2

-0.6

1.8

42.82

43.4

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032749

105952076 - 106042563

90488

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032459

105952076 - 106043456

91381

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105984891_105986147_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: