Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105992233 - 106011052

Intron Length:

18820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCATTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCTGTTCATT

Flanking Amino Acid:

DGSEYACEVEKRSRGQVLFD

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

73.4

38.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.1

0.63

0.8

72.7

31.9

Minor 5ss

39.5

-1.2

53.1

44.1

Minor BPS

48.3

-0

2.4

76.4

40.9

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000035631

105952076 - 106016065

63990

ENSAPLT00000013080

105952076 - 106016065

63990

ENSAPLT00000023647

105952076 - 106083776

131701

ENSAPLT00000032749

105952076 - 106042563

90488

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

Intron Name: Anas_platyrhynchos_platyrhynchos_2_105992233_106011052_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: