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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106016066_106042509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

106016066 - 106042509

Intron Length:

26444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGTCT

5'SS Class:

major

3'SS Sequence:

CCTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TACTCAGTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

69.1

38.1

Major BPS

0.57

1.2

41.2

Major PPT

0.79

0.8

78.9

33.1

Minor 5ss

33.5

-1.9

3.3

39.6

45.9

Minor BPS

48.1

-0

2.3

71.75

44.5

Associated Gene:

Gene:

EPB41L3

Ensembl Gene ID:

ENSAPLG00000012505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021826

105952076 - 106043456

91381

ENSAPLT00000032459

105952076 - 106043456

91381

ENSAPLT00000020980

105952076 - 106043456

91381

ENSAPLT00000027803

105952076 - 106043456

91381

ENSAPLT00000026115

105952076 - 106043456

91381

ENSAPLT00000021933

105952076 - 106043456

91381

ENSAPLT00000032749

105952076 - 106042563

90488