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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106159766_106164495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106159766 - 106164495

Intron Length:

4730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCAATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

CATACTATAAAT

Flanking Amino Acid:

LSKAPRLKRRGFRKICSDLY

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

43.8

Major BPS

74.5

0.61

79.6

29.1

Major PPT

73.4

0.53

0.9

70.7

39.4

Minor 5ss

29.2

-2.4

2.5

25.2

36.6

Minor BPS

49.9

0.07

1.8

68.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042031

106147210 - 106165246

18037