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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106179824_106179931_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

106179824 - 106179931

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCCAGTAAA

5'SS Class:

weak_major

3'SS Sequence:

AACGCAAAGACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

ATCTCAGCAAAC

Flanking Amino Acid:

TSLESVANIPYTNKEKLFMI

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.4

61.9

42.6

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

47.8

-0.1

1.1

36.8

37.9

Minor 5ss

22.3

-3.2

3.4

30.7

Minor BPS

41.5

-0.6

2.3

55.67

42.1

Associated Gene:

Gene:

TMEM200C

Ensembl Gene ID:

ENSAPLG00000027090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032399

106179620 - 106181384

1765