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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106250927_106252343_F

Intron Information:

Intron Rank:

140315

Intron Class:

major

Intron Phase:

Intron Coordinates:

106250927 - 106252343

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCATCTTGA

5'SS Class:

major

3'SS Sequence:

TGCTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CCCATGTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

58.5

43.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.5

0.64

0.9

69.2

41.8

Minor 5ss

40.9

-1

3.8

58.5

Minor BPS

42.1

-0.5

2.3

54.88

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025034

106223380 - 106257843

34464