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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106427895_106437491_R

Intron Information:

Intron Rank:

138650

Intron Class:

major

Intron Phase:

Intron Coordinates:

106427895 - 106437491

Intron Length:

9597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTATTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GGACCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

82.2

0.8

0.9

81.6

Major PPT

89.5

0.89

0.7

85.1

29.5

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

51.1

0.11

1.6

63.95

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044293

106427741 - 106437678

9938

ENSAPLT00000024266

106427741 - 106440907

13167