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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106542625_106544530_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106542625 - 106544530

Intron Length:

1906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAC

U12 Branch Point Sequence:

CAGCTGTCAATT

Flanking Amino Acid:

QSLHEVGGNIGQHCLDPDAY

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

64.5

0.36

1.2

69.3

37.7

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

42.2

-0.5

2.1

53.96

Associated Gene:

Gene:

ARHGAP28

Ensembl Gene ID:

ENSAPLG00000011853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012379

106470592 - 106544622

74031