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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106557351_106558294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106557351 - 106558294

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

TAACACTGAATT

Flanking Amino Acid:

LLFNQSTVRKKLSVQLNLRT

Intron Amino Acid Position:

2608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

79.5

0.66

0.9

73.5

41.9

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

53.8

0.2

1.6

70.29

39.7

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070