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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106563105_106564226_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106563105 - 106564226

Intron Length:

1122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

ACTTCTTGGAAA

Flanking Amino Acid:

IGGLPRSRAMRKGLNSRTYV

Intron Amino Acid Position:

2319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

51.4

0.04

1.6

62.14

37.8

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070