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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106564369_106564998_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106564369 - 106564998

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

AGATCTTTACTC

Flanking Amino Acid:

KISFSRNKKQGMLAVMDAYN

Intron Amino Acid Position:

2272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

39.3

Major BPS

0.6

65.6

41.1

Major PPT

87.1

0.84

0.7

84.4

30.5

Minor 5ss

-0.3

3.1

66.9

44.7

Minor BPS

56.6

0.19

1.6

62.09

37.6

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070