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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106570632_106572571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106570632 - 106572571

Intron Length:

1940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CACTGTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATC

Flanking Amino Acid:

SLLTLKALPNGTRKYVLEVK

Intron Amino Acid Position:

1879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

0.9

72.8

37.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

76.7

0.82

78.69

30.3

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070