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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106577030_106577131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106577030 - 106577131

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAAGAAC

5'SS Class:

major

3'SS Sequence:

TTTTGTTCGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTGTTCGACA

Flanking Amino Acid:

VNVAASVVQDNLEVHQDGLV

Intron Amino Acid Position:

1718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

66.4

39.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.7

0.67

76.6

37.7

Minor 5ss

33.3

-1.9

3.3

41.6

38.8

Minor BPS

55.1

0.15

74.34

37.6

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070