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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106588363_106588485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106588363 - 106588485

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAAAT

5'SS Class:

major

3'SS Sequence:

CCCTTACACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

PAGYTGFSCQNCAPGYYREK

Intron Amino Acid Position:

1340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

73.7

36.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.3

0.39

0.9

61.1

33.1

Minor 5ss

34.1

-1.8

3.2

49.2

46.6

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070