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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106589958_106590842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106589958 - 106590842

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CATGTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGGTTTTAATA

Flanking Amino Acid:

RSDKEVEMKEDSWKYFNSVS

Intron Amino Acid Position:

1257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.3

0.39

0.9

58.8

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

60.4

0.32

1.3

64.28

37.1

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070