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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106597638_106598762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106597638 - 106598762

Intron Length:

1125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ATAAAGTTAATC

Flanking Amino Acid:

FHSFQNGGCTPCDCAHTQNN

Intron Amino Acid Position:

962

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

74.9

38.1

Major BPS

80.4

0.76

80.3

31.8

Major PPT

86.7

0.83

0.8

81.1

30.9

Minor 5ss

42.8

-0.8

2.8

53.7

43.8

Minor BPS

46.9

-0.2

2.2

59.61

39.2

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070