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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106599922_106600439_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

106599922 - 106600439

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTAAACATAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCCTAAACA

Flanking Amino Acid:

GDAVAEKSCRACECHVNGSL

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

41.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.05

1.1

55.3

37.9

Minor 5ss

45.7

-0.5

2.9

61.8

44.9

Minor BPS

1.5

91.36

30.2

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070