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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106600652_106601018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106600652 - 106601018

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CAGCTTTTAATT

Flanking Amino Acid:

LPGHTGFQCERCANGYYGNP

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.6

0.55

68.9

41.4

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

58.5

0.35

1.3

65.44

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070