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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106612938_106614141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106612938 - 106614141

Intron Length:

1204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TATTTGAGAATT

Flanking Amino Acid:

CADGYFRPHKVSPYDDHPCY

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

30.6

Major BPS

76.9

0.67

66.3

40.4

Major PPT

75.3

0.57

0.8

70.3

35.7

Minor 5ss

42.3

-0.9

3.1

58.2

40.1

Minor BPS

45.6

-0.2

2.3

70.62

40.4

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070