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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106616082_106619493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106616082 - 106619493

Intron Length:

3412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTCAACT

Flanking Amino Acid:

KELDPIVTRRYYYSIKDISV

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

39.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.5

0.71

0.8

77.5

36.4

Minor 5ss

36.9

-1.5

39.1

46.1

Minor BPS

68.5

0.66

1.5

83.3

38.2

Associated Gene:

Gene:

LAMA1

Ensembl Gene ID:

ENSAPLG00000010343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010850

106550005 - 106632074

82070