Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_10663121_10681525_R

Intron Information:

Intron Rank:

146723

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10663121 - 10681525

Intron Length:

18405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACACGC

5'SS Class:

major

3'SS Sequence:

CCTCACCAGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

CTCACCTCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

56.8

42.6

Major BPS

63.6

0.34

65.3

32.1

Major PPT

59.2

0.21

53.6

35.4

Minor 5ss

32.4

-2

3.1

42.6

44.3

Minor BPS

48.6

-0.1

1.9

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043365

10661013 - 10682373

21361