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Intron Name: Anas_platyrhynchos_platyrhynchos_2_106782423_106889235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106782423 - 106889235

Intron Length:

106813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATTTTTATCT

Flanking Amino Acid:

LLAAGAQTFTGCCTFDEPFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.9

31.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.6

0.71

0.9

75.8

38.1

Minor 5ss

33.8

-1.8

3.7

49.2

47.3

Minor BPS

59.2

0.37

1.5

71.92

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291

ENSAPLT00000033580

106782350 - 107251640

469291