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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107088858_107096053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107088858 - 107096053

Intron Length:

7196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

ACCATCATGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTTTCCACCACT

Flanking Amino Acid:

FLGVVLVMKKRRSYHSYTYY

Intron Amino Acid Position:

765

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

60.3

0.23

1.1

54.8

39.4

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

55.4

0.25

2.3

85.52

40.5

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291

ENSAPLT00000033580

106782350 - 107251640

469291