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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107088858_107148679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107088858 - 107148679

Intron Length:

59822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTCTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TTTTTCTCAACA

Flanking Amino Acid:

FLGVVLVMKKRKLAKKRKET

Intron Amino Acid Position:

790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

74.9

0.56

79.3

32.9

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

78.1

0.88

1.4

87.43

30.3

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000029550

106782350 - 107251640

469291