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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107151689_107155865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107151689 - 107155865

Intron Length:

4177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCTTAAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

ATCTTCTTAAAA

Flanking Amino Acid:

PDPFVPTAILVPINDETHTM

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

66.3

0.37

1.1

68.3

35.9

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

70.9

0.65

1.3

74.59

36.8

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291