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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107191721_107197094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107191721 - 107197094

Intron Length:

5374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

MKNRYGNIIAYDHSRVRLQP

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

79.9

0.67

0.9

76.7

37.4

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291

ENSAPLT00000033580

106782350 - 107251640

469291