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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107231147_107235305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107231147 - 107235305

Intron Length:

4159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATATTTTCAACA

Flanking Amino Acid:

YVIRTFAVEKRGVHEIREIR

Intron Amino Acid Position:

1066

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

74.8

0.56

70.7

39.1

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

62.6

0.39

1.5

70.51

35.4

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291

ENSAPLT00000033580

106782350 - 107251640

469291