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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107235890_107236563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107235890 - 107236563

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGTTA

5'SS Class:

major

3'SS Sequence:

ATTGCTTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTATTTTAATT

Flanking Amino Acid:

SRRVNMVQTEEQYVFIHDAI

Intron Amino Acid Position:

1163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

70.3

36.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.3

0.55

43.2

Minor 5ss

46.5

-0.4

3.1

64.4

Minor BPS

71.7

0.76

1.1

82.37

32.8

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291

ENSAPLT00000033580

106782350 - 107251640

469291