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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107236714_107237180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107236714 - 107237180

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCTTTTTGAAAG

Flanking Amino Acid:

NSSQIKEEFRTLNMVTPTLR

Intron Amino Acid Position:

1213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

84.4

0.85

34.5

Major PPT

69.7

0.44

1.1

73.5

34.9

Minor 5ss

41.5

-0.9

2.9

46.3

Minor BPS

54.6

0.01

1.6

60.71

41.4

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291

ENSAPLT00000033580

106782350 - 107251640

469291