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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107239538_107242672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107239538 - 107242672

Intron Length:

3135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTTCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AATAATTAACTC

Flanking Amino Acid:

VMLNDVDPAQLCPQYWPENG

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.1

0.56

0.9

70.1

36.5

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

40.6

-0.7

1.9

47.2

36.1

Associated Gene:

Gene:

PTPRM

Ensembl Gene ID:

ENSAPLG00000008518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033580

106782350 - 107251640

469291

ENSAPLT00000029550

106782350 - 107251640

469291

ENSAPLT00000045800

106782350 - 107251640

469291

ENSAPLT00000020518

106782350 - 107251640

469291

ENSAPLT00000044365

106782350 - 107251640

469291

ENSAPLT00000009028

106782350 - 107251640

469291

ENSAPLT00000038143

106782350 - 107251640

469291