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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107290769_107301071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107290769 - 107301071

Intron Length:

10303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTTAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTTATTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTCCTACTT

Flanking Amino Acid:

IEPWLLFLAACVDFKIKTVE

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

70.7

39.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.74

0.8

77.8

Minor 5ss

37.9

-1.4

3.4

61.1

43.2

Minor BPS

53.9

0.2

1.9

76.93

39.9

Associated Gene:

Gene:

RAB12

Ensembl Gene ID:

ENSAPLG00000008252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008583

107289458 - 107311226

21769