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Intron Name: Anas_platyrhynchos_platyrhynchos_2_107301133_107308463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107301133 - 107308463

Intron Length:

7331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAG

U12 Branch Point Sequence:

TTTGTGCCAATG

Flanking Amino Acid:

LRGKKIRLQIWDTAGQERFN

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

49.1

-0

1.5

57.8

Major PPT

71.5

0.49

0.9

69.2

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

39.4

-0.9

2.4

51.34

43.7

Associated Gene:

Gene:

RAB12

Ensembl Gene ID:

ENSAPLG00000008252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028333

107289458 - 107310976

21519

ENSAPLT00000008583

107289458 - 107311226

21769